(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: ZZ1
File name: alatis_output_compound.sdf
|
Formula: C10H8O2 Compound mass: 160.16900000000007 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| ZZ1 | 4R6P 4R6O 2CIP 5GZA |
| 3AV | 4TY8 |
| MCM | 5DC7 5DC6 3EWF 5D1C 5EFN 5DC8 5XHS 2V5W 1VAI 5EFK 4QA5 4FZ3 5D1D 4QA6 5BWL 1VDN 4QA7 |
| 4MU | 3ETS 5IK5 5IK8 4AX7 4V28 5JR3 |
| COU | 3L5M 4UTI 3CRB 4UTL 3L68 1Z10 3L66 2PMJ 2H90 2PWB |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.