• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: X2W
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 0.64
• Compound probability: 0.76

List of identified carbohydrate fragments:

• C₅H₆N₁O₄
  Fragment probability: 0.64
  Fragment mass: 145.11310000000003
  Fragment main chain atoms: [6, 3, 2, 5, 7]
  Fragment all atoms: [6, 10, 16, 3, 23, 24, 2, 21, 22, 5, 25, 8, 7, 11, 12, 27]
  

• C₆H₉N₁O₃
  Fragment probability: 0.58
  Fragment mass: 130.1216
  Fragment main chain atoms: [7, 5, 8, 4, 1]
  Fragment all atoms: [7, 11, 12, 27, 5, 25, 2, 21, 22, 3, 23, 24, 8, 4, 9, 1, 18, 19, 20]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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