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v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: X04
File name: alatis_output_compound.sdf

Formula: C8H11N2O6P1
Compound mass: 262.1561000000001
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
X041O69
PLP1P2G
3WWI
2ZP7
1K06
3DDW
1MDX
4BQ0
3UZB
4YSN
5G2P
2C2G
2RKB
2ZY3
6QVG
1TZ2
4UQV
4EB7
1G79
4B9B
1TTQ
2W7K
4Z5X
2X5F
1GC3
4ZM3
5GJO
1OHV
5K1R
1SZS
1TAR
1UIN
5WMH
5B55
2EIY
3CEH
1IAY
6OIA
5QQQ
1DTY
6QA8
2A1H
2ZY4
2JC3
6KNI
1OHY
1H1C
2DGL
1QJ3
5B89
2AY6
6SNU
5I7R
5LRF
1M32
1IX8
3VBE
3CSW
2CIN
5QRD
1I1L
3WQE
5FT8
1O4S
5ZL6
1C0N
1WYV
2RJG
5YB0
3ATH
1XI9
3NMY
6CZZ
4BHE
5DB5
3ANV
5FT5
5G4I
1SF2
5Z5C
3DXV
5LNR
1TTP
5KQU
1QGN
1RVY
1E4O
1V8Z
4Y0H
1QZ9
1N8P
1XOI
3IF2
4H6D
6H65
3B1C
2P69
4BQF
1RFU
2Z1Y
1PG8
1CW2
3IHJ
5BJ4
1L6I
6O12
2BYL
4ZM4
3A9X
1P29
3DWG
1KL7
5X7M
5QQX
4S1I
4M2K
2Z20
3CEM
3PPL
2AY1
4B98
2YCT
4LW2
6KFR
1SFT
2ZSJ
3VOM
6O10
6S54
5E25
1C7N
1AHE
1VEF
2COI
1P5J
4CXR
1K7E
4WYF
1I48
4ATP
4A0F
2X3L
2Z1Z
5YHV
2W8T
1EXV
5QQW
5OHX
3KOW
3TAT
1RV3
1ASF
4AH3
3JZ6
2YKX
1P4H
2Z67
4UOX
4GSA
3E77
3AOW
5I5V
5I6D
1OAT
3WWJ
2HGW
1I43
4WYD
4A72
1NOI
4K6N
2W7I
1W8G
1J0C
2HZP
4OTL
2DGK
5UID
5YYC
1AKA
8GPB
5W71
4PB3
1WW2
1FU8
3ZCQ
6HNV
1ARI
3L6C
3II0
3NZP
1FCJ
2ABJ
6GIO
5XEN
1DJU
5Z0Q
2BHT
3UYY
2HDK
5JTT
4AO9
5I5U
2CLK
1RQX
5OG0
5K30
5I7O
1A3G
1K7X
6DND
2BHS
5G0A
6GPB
3DYD
5KGT
5CM0
4RKD
5BWU
3DDS
2BWO
5VER
3GJU
1GPA
2VMS
6EZL
3RBF
3LVJ
1LS3
2O1B
4E1O
5LRB
5B36
1I1M
1N2T
1WV1
3CO8
5BWR
2QN9
1OHW
4ADC
2COG
2V03
4XJM
9GPB
3B8T
1AAW
5O5C
2ZGI
5HNE
2E7I
5QR8
3I5T
1C8L
6QKB
4XJO
6QVL
5LUC
3ZCT
1EG5
1N31
2CJH
1GC4
4MH9
3F9T
2VD8
1FUY
5WKP
5X7N
6EWQ
1AHY
4ZWM
1MGV
2D61
1PMM
3B8V
5O52
2OO0
1D2F
5CR5
1ASM
6PK3
5I7A
4YUA
4OBU
3L6B
2NMP
6F35
1WYU
6HBS
2BI9
5QQY
1EQB
2VMP
5KQT
3B8W
2DGM
2QN7
4PCU
1YJS
5XEM
1QM5
4O6Z
5MPR
4ATQ
2ASV
2NV9
1CJ0
6ENZ
3AMV
3FCR
1B4X
3VSA
2AV6
1L5Q
2W7G
3T18
3DTG
3O05
4Y6G
5I90
6GKR
5QQU
2VIB
3KKI
2AY9
4L27
6N2F
2CLI
1TYZ
1WDW
2BI1
5QRB
4V15
1W3U
2HGX
1SZU
2A5H
3ZRP
1XQL
1P4J
5QR3
5KGS
1V72
4AZJ
5KR5
5MMS
4QGR
1YGP
2BIG
5BWV
2DAB
6KFM
5QQT
5LH9
1L5W
6MRH
3VAX
1AHX
1WW3
1VE5
2PRI
3ISL
2BI5
5CVC
5YD2
1DGD
6F5V
5KR3
6HTE
1J0A
4WR3
3ELE
6FYQ
2VGV
1Z7W
3LVM
1LWO
1AHG
1IYD
2DKJ
2VGS
3EIB
6Q71
2SFP
1M4N
5I5W
4XUG
2C2B
2BYJ
3KGW
5HSJ
2Y4R
4DQ6
5MEM
1BT4
2F3S
5QR2
6Q72
1QU4
5OX0
1TZM
1E1Y
2VMQ
1GFZ
4BQE
3CEP
5IWQ
1O61
4L0O
1FC4
4ADD
4W1X
5DX5
4CXQ
1W7L
5X03
5FAC
4RXK
5OX1
4UOY
2VGZ
2VI8
3ZZJ
6ED7
1LW4
4DGT
4ZU6
2AY5
4L0D
5OWZ
2BIE
2BWN
2YXX
5JTU
1F2D
1CZE
5TXR
7GPB
1L5S
4WYA
5GP4
1WBJ
3BV0
3B1D
2JG2
2D63
5FAG
1C7G
6A6G
3N2O
1IAX
1U08
1M54
3KP1
1MLY
6F3S
4JEY
6I34
4BMK
1WUT
6C73
6MFB
4A6T
5D87
5OX3
3K7Y
5KR4
4BEU
4W1V
4WX2
1IBJ
6R0I
3SS9
2D1F
2VYC
5XEO
3UZO
1TDJ
3L8A
6PK1
5LRA
3AWO
5QRE
1D6S
3X43
1XL0
5I5Y
1HKV
1C50
5HDM
4BEQ
4PB5
4XJP
1EKV
4W5K
1C8K
1QOQ
2AQ6
1KFK
1XEY
1AY8
1ORD
5QRA
3DWI
1G2W
1GCK
4JF1
4PFN
3BD7
2COJ
1WV0
1K3U
4FL0
5QR6
1GEX
4DAA
4OT8
5GJP
1LKC
1YOO
2AZD
1B54
5BW6
1V2E
5WLW
4HT3
1GGN
4L3V
5MCB
2D7Y
6F3R
2VLH
1P2B
3ZCV
3ZEI
5X2L
6DNA
1W7M
2FF5
2FYF
1BJO
3HQT
1K08
4ADB
2HP1
1J32
5I7H
1CZC
4ZLV
5M49
5OWY
1L7X
2C0R
3LV2
1ARS
5QR1
5BWT
1ZOD
4BQI
5QR4
2AY4
6A6E
2ECP
4AZK
1V2D
4NOG
2VMU
3WQG
1G7X
4PFF
1ASA
4PB4
1RV4
7AAT
5IWC
1YAA
1I29
4EMY
1KKP
3WQC
6HUL
5OFY
1F3T
2VMX
6PD2
5B53
6I33
2DY3
6F77
2ECQ
1GBN
2AW3
1WRV
7ODC
2W7D
6HBV
2VMW
1NRG
1L5V
5IKP
4N0W
1WUY
5O54
6G4D
2FET
6EGR
6MRE
4JE5
5B87
1C29
3DU4
1FU4
2VMO
2ORD
5QR9
6KFU
1VE1
4R2N
1A5B
2AY7
1B5P
1JS3
4A0H
5XT5
4WYC
4TLO
5E4Z
2BI2
6NZU
1JS6
6HRH
2YKU
2PB2
6Q70
1V71
1KL2
2W7E
1ART
1VJO
6F3L
2VMR
3KAX
1S07
2CTZ
1KKJ
8AAT
2GPA
1XKX
5LRE
4XJL
1BJ4
1ECX
2AY2
1P3W
2AY8
5BWX
3QBO
1EM6
1L5R
2ZY5
2JJH
5QQV
4CHI
1NOJ
5DDS
1CT5
4EB5
2AMV
5LRC
3BB8
5CGQ
5QR0
6EQN
1H0C
3G8M
2UZP
2BHX
2PQM
2CLF
1P2D
1I1K
2X8U
1TZK
1KFB
1J0E
5Z83
2FNI
1DJE
5QQZ
5K3W
3RCH
3DD1
5IW8
2EFY
1C9D
1C8V
5EY5
3ZCP
3DOD
1QJ5
4LW4
2HG8
2YKY
3VSC
1UIM
5EQC
1Z3Z
3DXW
6G4E
5I60
5IJG
2CST
5M3Z
2XH1
4W1W
2EO5
4L28
2VMZ
1KTI
1GDE
1TZJ
2VMY
4PPM
5I5S
3AAT
3WQF
2VGW
1TJP
5GPB
2C4M
5D84
2J66
3WQD
3EI8
3LY1
4WYG
2JIS
2CAN
1MLZ
1W23
6ERK
2CJD
3HY8
4ZQC
1BKS
3A9Y
2BIA
2C7T
6QA6
6FL5
1KNW
3E5P
4UHO
5CE8
5BJ3
5BWW
2D65
1G78
5LRD
3NNP
5LR8
6HNU
6Q6I
5FT4
2EJ3
1K8Z
2ZUK
5B54
4YI5
1XFC
4WBT
2ZB2
2D66
3BD8
1A5A
3VSD
3KEU
5FT6
3COG
1RCQ
2VI9
1VFH
1XRS
1YJZ
5ZWA
1GD9
3ZCU
1UZU
2YOB
5Z8A
5LL3
2EGY
6C2H
1B8G
6HX7
1B5O
4R8D
1P4G
2J9Z
6UXE
5KR6
2BI3
1A5S
1B9H
6GWI
1OAS
1LK9
2W8U
4A0R
3LVK
1RVU
3TQX
1GPB
1MDZ
2GSA
1JF9
3C5Q
1ZOB
3MEB
1VP4
1DKA
5WGB
4QYS
1FTY
4A0G
4CVQ
2JJG
4XAU
1KMJ
1K8Y
4XEW
1V2F
6F3U
4CBR
1TAT
4CBS
5QR7
2EH6
1TWI
1FTQ
3GPB
4AEC
3NYS
1FU7
3R79
2RHG
2TOD
2VIA
4UHN
2ECO
2SKD
5Z8K
2ATI
2F3P
2GPB
3SS7
2QLL
4CTO
2E54
4M2M
4LMA
2YRR
3TFT
5O56
4CMD
2HP2
5F9S
5NM8
5QRC
3A9Z
1NOK
1EKP
4GPB
6MR2
2AY3
3AOV
1IJI
2E7J
5OX4
2WK9
4CE5
3AWN
1AHF
1ASB
4YI3
5QR5
2CB1
1K8X
5BWA
2VGT
3FDD
4COO
2QN8
1GEW
2F3Q
2PB0
2X5D
6CGQ
3N29
1QOP
1FS4
3BM5
2D7Z
1EKF
6HND
3HMK
2BKW
1JBQ
1AAM
1DGE
5QQR
1ET0
5HH9
5QT3
3ZCR
3K28
2VMN
3LVL
1FG3
1AY5
2HHF
3A2B
1KL1
1T3I
2CLH
1QIR
6FTE
6G4F
1FC0
2JJE
1HLF
1C4K
2RH9
5HXX
5QQS
3PC2
2D64
1ASN
2W8V
1DAA
1G77
6MR6
1FA9
2SKE
2DR1
2ISQ
1WKV
1WST
1AXR
1WTC
2SKC
2CFT
5D86
4A3Q
6F3J
1FTW
4BF5
6MRI
2WK8
4YWR
1JNW
1IX6
1I2K
1E5F
6ULD
1G4V
2W7M
6QA7
2YHK
2W7F
3ANU
2W7J
2QGH
2VGU
1AHP
3BDA
5I5T
5DAA
3B8U
1G76
3E9K
5WT2
5C6U
1ELQ
5M46
5T4J
1KMK
4CTN
4F4F
4WYE
2PRJ
2W7L
1LW5
4CTM
1G7W
1GG8
5O50
2W7H
6N2A
1UBS
2DKB
1GPY
5C3U
2VMT
1H5U
2F3U
1XL1
1KFC
2DH5
3CEJ
5IKO
2D5Y
2CLE
1AY4
5X5H
1IX7
1CX9
4UHM
1QIT
5EAA
1KO0
3ZCS
1A50
4H67
3A8U
3WWH
2VMV
2WSY
6R0H
2ZY2
2FFR
1B4D
1BX3
5J8Q
1LWN
1YJY
3I16
1QIS
1XC7
4M2J
4ZGY
1ASG
4LMB
5D5S
1K7F
3FHX
1Z62
1G4X
MPL1ASD
PLR3FZ8
4LNM
4ZDP
3FSL
6K8H
2GJ4
3HL2
3USF
3PIU
2IEG
5D95
2IEI
5VYE
4ZDO
5HHY
1PMO
3GZD
4LNJ
3GZC
3MAU
2GM9
4ZDL
2CFB
4QYS
PDP1PYG
1ABB

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).