(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: WWO
File name: alatis_output_compound.sdf
|
Formula: C15F3H15N2O5S2 Compound mass: 424.41459999999995 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| WWO | 5OGO 4QJW 5EHE 4QTL 4QJX |
| 5EF | 5DRS 5LLO |
| V1F | 4QJO 4QJP 4QJM |
| V14 | 6FE1 5E2M 4Q09 5E2N 6QL3 4Q0L 4Q07 4PYY |
| 6Z9 | 5LLP |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
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- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.