(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: UVW
File name: alatis_output_compound.sdf
|
Formula: C2H5O5P1 Compound mass: 140.03170000000003 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| UVW | 1XCO 4MVA 1E7Q 1E7R 5IBZ 4MVJ 1E6U 1E7S |
| EFS | 2WSL 1XLV 1P6B 3CAK 5HF8 5HF6 |
| ATJ | 2C0P |
| XPO | 4IOL 4JKI 4JJZ 3RBO 4IOK 3SIN |
| MIP |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.