(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: TC7
File name: alatis_output_compound.sdf
|
Formula: C6Cl3H3O1 Compound mass: 197.44630000000004 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| PCI | 1Y4Z 4RPN 2GWH 2WDR 3SFD 1Y5N 2VPY |
| TC7 | 2VCE 5M8X |
| 35C | 3O32 3I4Y |
| 5JD | 5E1X |
| T6C | 5MA1 4KN3 4RPO 4KMW 4KMV 5ZZG |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.