(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: SVR
File name: alatis_output_compound.sdf
|
Formula: C51H40N6O23S6 Compound mass: 1297.2781000000034 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| SVR | 3BJW 4J4V 1Y8E 3UR0 1Y4L 2NYR 6CE2 3GAN 3PP7 4YV5 4X3U 3BF6 2H9T |
| 0BU | 4MTZ 3UPF |
| F2H | 6GJW |
| 2NG | 4NRU 4NRT |
| GOW | 6HSZ |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.