(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: SUI
File name: alatis_output_compound.sdf
|
Formula: C6H8N2O4 Compound mass: 172.13840000000005 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| SUI | 2OWX 1GVU 1GVW 3URL 2VS2 3URJ 1OEW 2JJJ 3URI 2OWW 1GVT 1OEX 1GVV 2OWC 2JJI 1GVX 1GKT |
| SIC | 3DIP |
| 9BP | |
| 9WV | 5W6R 5W6T |
| DYW | 6FMQ |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.