• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: RZM
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 1.00
• Compound probability: 1.00

List of identified carbohydrate fragments:

• C₆H₁₁O₆
  Fragment probability: 1.00
  Fragment mass: 179.14750000000006
  Fragment main chain atoms: [10, 9, 8, 6, 21, 12, 20, 35, 45, 34, 19, 44, 33, 18, 43]
  Fragment all atoms: [10, 9, 8, 6, 31, 3, 27, 28, 16, 41, 21, 12, 37, 22, 20, 35, 45, 34, 19, 44, 33, 18, 43]
  

• C₆H₁₁N₁O₄
  Fragment probability: 1.00
  Fragment mass: 162.16330000000002
  Fragment main chain atoms: [13, 5, 11, 7, 4]
  Fragment all atoms: [13, 5, 30, 2, 25, 26, 15, 40, 11, 36, 22, 7, 32, 17, 42, 4, 29, 1, 23, 24, 14, 39]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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