(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: POY
File name: alatis_output_compound.sdf
|
Formula: C15H22N4O3 Compound mass: 306.3593000000001 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| PNX | 3ARU 3TVX 2A3C 3ARR |
| POY | 3AS2 3ARX |
| IBM | 3ITU 3JWR 3JAB 2HD1 2YY2 6CPT 1SOJ 3N3Z 1ZKN 3DYS 1RKP 3DY8 3ECN 3QI4 3DYN 2R8Q 1ZKL 3DYL 3DYQ |
| DW0 | 2YBT |
| CX9 | 2YBU |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.