(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: PMC
File name: alatis_output_compound.sdf
|
Formula: C7H8N1O5P1 Compound mass: 217.1156000000001 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| PMC | 1I43 |
| 60M | 5HH5 5HH4 |
| 60N | 5HH6 |
| NTM | 2B7N 5KTO 4R3X 5AYY 4ZK6 5LQS 1QAP 1QPQ 6F4L 3C2O 4YWD |
| 6PC | 4M1E 6O4D 4HSJ 5GJA 4YZZ 5WOL 2OLN 4YIC 3HZL 2OLO |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.