Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: O2
File name: alatis_output_compound.sdf

Formula: O2
Compound mass: 31.9988
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
OXY4FDK
1H57
2PG8
1Y01
5TKH
6BMG
5INV
2VQB
5Z27
5J53
2IH8
1DZ8
6BD9
1YE0
3LQD
2ZS1
3WCV
1FAW
4YU3
5SW6
5NIT
1MXT
5MDL
5SYI
2D2M
1HMO
3WNI
3TBB
4ZTT
6BD3
3UBC
4F4O
2Q9O
6G75
5KAG
2NP9
5Z1X
2P5B
5KT9
5INU
6RHO
5SXX
6CDQ
1IDR
2RAO
1YEU
3WCW
1GW0
2GBW
3IC0
1QXE
1A4F
1YEO
6FOQ
5ER0
5MJC
1YHU
3WCT
1V8X
5SYY
3FS4
5JDO
1OQU
5KQH
5MJH
5SYX
5MHU
4B4Y
3B75
4Y08
1GBV
3S1I
1GZX
5EE4
2DN1
2Y69
3LGN
6RII
4F6I
5V53
5ZDP
5TKG
4NBB
5LHL
5SYW
4E9W
1YIH
5V5J
5TKF
6MQ0
4M6Y
4JNP
5HY8
1YEV
6FDJ
3TF0
2A1N
5MHW
5Y52
2ISL
6RHP
4WCH
6RIK
1Y8W
5MHX
3MJP
2C0K
1YCF
4ENZ
6RKO
1U4H
5KSG
5VN0
4GT2
6FOW
3WHM
5MEJ
4DQG
3FPC
5FSJ
3A0G
6CFQ
5MHY
5IMS
5SX0
3KVA
5KSN
3WNJ
5MIB
1OXY
2D2N
1YHE
5SXR
3PI2
5KQI
1SDW
5V5R
5SX6
5MI2
1U55
4CW3
1YEQ
3EEE
3PPS
4YU4
6F0C
5YJ2
3O72
1YHR
5KQ0
6MPY
5SW5
4F6D
5MKM
5Z2B
4KJT
3VMI
2XVJ
1YEN
6ETB
6FJH
2OLP
4G8W
4E9Y
1MNO
6RGP
2QMB
3FH9
1YIE
2ZS0
3VMH
4MQJ
5SXQ
4WJG
1YE2
5SX7
1XBN
4B2N
1YDZ
3BCQ
2SPN
2A1M
1HBI
2XVI
3NVU
1LTW
4X0L
2R80
1YGF
5SYU
5LG2
4KMV
4Q8B
5SX1
1YG5
4FH7
3T6W
4AKO
5V5Q
2VEB
3R5I
5SXS
5FLJ
2BKM
5MAP
5SYV
4F68
3KV6
1J30
5MIA
1YH9
6RH9
2YM1
3WTG
5JRR
5EOI
5KQ2
5VTT
3KVB
1LS1
1DCC
5L05
5KQQ
5JIG
1N4U
2MGM
4X0I
5HU6
1THB
1S66
2XIH
2GDM
5SX2
3TF1
6RHH
4AKP
2VZW
2ZFO
1O7N
4E9X
5Z29
3ZDW
6RI0
1WQL
5Z2A
3WA2
6CC6
5FW4
6RHI
3DKH
6FYC
1YGD
5SXW
5SYK
4EIR
6FC7
5J54
4D19
3IXF
2QFN
1F65
6I3L
6RIL
1HJ3
5SX3
5KQK
6RI6
3TBC
1DP6
6MQ1
5V4O
5HAV
6FP3
3FU7
4GHF
5J55
5SXT
3UBV
3QM5
4FH6
2A1O
2XKH
3PT7
5KSF
6RI8
3PI3
6CAW
5MIC
5CHR
5ONX
1UVW
2WTH
4G7L
3IQB
5YJA
2XKG
5VTS
5LG8
1O7M
4LXJ
5TXQ
1RZA
3V9C
5KSK
2WSD
1W6L
3ZDS
1YOI
3TAS
5KT8
2Z6S
5MHZ
5O3K
5MHV
1HHO
4J3P
5MI1
1QPW
1HGC
3WKO
3GKE
4G8U
4CW6
3PI1
1V07
1A6M
5MJD
5NIW
4F0H
3PU8
5KQ3
3IC2
2YAE
5FRC
3AQ5
2X88
1E5D
2VYW
3KV9
2VLY
5Y2P
6RHX
1YFW
2WTG
4AKQ
5Z22
6B9B
2QD5
4GS1
1MBO
1VB6
5SYH
3NVR
1ASH
3GL0
2IGA
3PUS
5LLD
6HK2
5TI9
1OF0
6RI4
2J5W
3NPE
3HCR
5MIE
2GEW
4QMA
5KQN
1B86
2VYY
4D17
5SW4
5KQ6
1Z8P
6BB5
1N40
2ZKA
6CEK
1KR7
1S67
4H0B
5MID
1RZC
1Z8O
1QWL
6RHU
2D09
3ZX1
4OP6
2VYZ
4WWZ
4QUR
4J3R
5MEW
4ILZ
1Z8Q
2ZKB
3CKS
O2
2FK
CNF1R1N
6505HSS

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).