(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: N16
File name: alatis_output_compound.sdf
|
Formula: C19H18N2O2 Compound mass: 306.35769999999997 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.38
- Compound probability: 0.09
List of identified carbohydrate fragments:
-
C2H3
Fragment probability: 0.38
Fragment mass: 39.0558
Fragment main chain atoms: [1, 13]
Fragment all atoms: [1, 24, 25, 26, 13]
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| N16 | 3HKD |
| DLK | 6FKL |
| GHV | 5C1U |
| 5EB | 5DP6 |
| 5F2 | 5DPA |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
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- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.