Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: MO
File name: alatis_output_compound.sdf

Formula: H1
Compound mass: 1.0079
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
SM5UM9
5KTJ
6NBT
4P1J
5LXR
1CX8
1YZR
2ANX
5G3S
4ZHH
5K97
5ZC0
5NSJ
2O5W
1DKH
1LT7
1R14
5KSE
2ANV
1QAT
3Q8L
1A4Z
2WJD
2X3L
4REB
2HYZ
1EXZ
4P1H
1SOI
5ZB8
1BIX
3KLT
1XR5
1QJM
1UZP
2X6C
1A3C
2O3H
3Q8K
2TCL
4AFP
2E0Y
4F3V
2VZY
1TVG
1DT6
XE1C6K
2W72
6AYK
1C6N
1UO6
2OQE
5KPU
5HW1
2XKH
2Z8Y
2B2J
4ZZC
2A7C
3S38
2W6V
3S3A
1UX9
4YLH
1C62
2A7B
3S3D
5A6V
3S39
3TFA
3G46
5C2W
5BU8
1KQN
4PWB
5HW5
2A7A
1J52
1FZH
1C3L
1UYU
5I63
4GUV
3BVD
4NXA
3PKL
1C10
5GUX
2W0Q
1K4K
1RJO
1S56
3ORD
3U52
1E9V
4O4T
3LZY
1W2Z
1RKY
1C6H
1C68
6QII
3TFE
1C6B
5NSW
1GKZ
4ZZB
4NWH
5O1K
1URY
4WNA
5O27
3PKF
2A7D
3S33
2W6Y
3S3C
3C9I
1ZDM
3FGR
3QPK
4MGH
4WN9
3PLG
3PK4
3S23
3GLN
1UVX
1U0X
3S3B
1C65
3ZJR
1I4W
3PLE
3PKH
3PLH
4L78
3TF1
3MOU
3PK5
2FIC
1W53
3CYU
3TF9
3LS7
3ZJS
1FZI
1UVY
1C1M
1C6E
3PLJ
6ASM
1L1G
2W6X
3FBX
1O75
1VAU
3M3D
3PKG
2OQU
1LLS
3FZ6
2A9R
3GK9
6FY9
2Z8A
3PLI
3PK6
1UOC
3PKK
1C6T
2W6W
1L0Z
3PJK
5M69
2DKI
2IE6
2IC0
3PLM
1FO6
1VGI
2ZFE
1NXT
AM4ZHG
RE5K1N
6RO3
6RO5
5NBJ
1B0Q
6F9P
5K1J
3KAM
ZCM4ZHF

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).