Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
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v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: MNU
File name: alatis_output_compound.sdf

Formula: C11H18N3O9P1
Compound mass: 367.24840000000006
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 1.00
  • Compound probability: 0.42


List of identified carbohydrate fragments:

  • C5H8N1O4
    Fragment probability: 1.00
    Fragment mass: 146.121
    Fragment main chain atoms: [8, 7, 6, 23, 10]
    Fragment all atoms: [8, 35, 16, 40, 7, 34, 15, 39, 6, 33, 4, 31, 32, 22, 23, 10, 36, 14]



Most similar ligands:

Ligand Expo IDPDB protein complex ID
MNU1XMO
RT
5MU1VY5
6CZR
4W2I
3CW6
5LZC
4V5G
6C4H
4QCU
4WR6
6OF1
4WT1
3J36
6CAE
486D
3J0Z
5L3P
4Z8C
4V6P
4WQ1
5J3C
4QCM
5EL6
4RBJ
2WRK
1VY4
5W4K
5MDV
4V5P
4Z3S
6O97
1GIX
6OT3
6QNQ
4V5Q
6UO1
4Y4P
4W2G
5JBH
5J4B
4Z3Q
4V74
4WSD
1KOS
5J30
6ND6
5WE6
6OUO
5JU8
5MDZ
1U6B
5DOY
1EFW
5E81
3J5B
5IB8
4V70
5VP2
4V6L
5WIT
5J91
6Q98
4V72
4V76
5IB7
1JGO
5V8I
4QCW
6B4V
3IZU
6EK0
2WRQ
6OST
6HRM
5J88
3J4Z
6OSK
5J5B
3J37
1EVV
4Y4O
5J4C
6MTE
3KIX
3JCN
5WFK
3J0U
2OM7
5EL5
4QCS
4WQR
5WIS
6GSK
3J11
1MJ1
3J5H
1VY6
1ML5
3J53
4RB9
5KCS
6GSJ
5DOX
3J10
3J4W
6ND5
4WPO
4V6V
1C0A
4RB7
4W2H
5EL7
6QNR
6CFJ
3J4Y
1F7U
4V6K
5J7L
4YBB
4V6R
4V77
5KCR
6BOK
5CZP
4RBH
6ORL
6N9E
4QCO
4V6Q
5LZF
1OB5
4V42
3J0X
4WU1
4QCY
3J0Y
5MDW
1SZ1
5JC9
3J0V
5FDV
5WFS
2WDH
3J5D
4RBD
2V46
3JCJ
1H3E
5FDU
4V6T
4V75
3J0T
1SER
6MTB
1EQQ
1FCW
2Y0Y
4W2F
4V71
4V5F
4ZER
2Y0U
5E7K
5IQR
5EL4
4B8H
5U4I
1IL2
3J0W
5J8A
5LZB
5DFE
4RBB
4V6O
4V7B
4V5S
3J59
5WDT
5IT8
4WZD
5J4D
4WSM
5L4O
4V5H
2Y10
4V8U
4V6N
2CZJ
4RBF
5WE4
2TRA
6OLI
3J5J
1ASZ
6OSQ
1JGP
1TTT
2FMT
3DEG
6BOH
6Q9A
2J02
6N9F
4V7H
3KFU
3KIQ
6U48
5WF0
5LMQ
3V11
4V78
4WQY
1EHZ
6FKR
3J4V
1JGQ
4QJT
1H4Q
6GSL
3J13
1C2W
5HAU
3J14
5LZD
5UQ7
3J57
2Y18
3FIH
5IBB
2WRI
5UQ8
5MDY
4V7K
1VTQ
5AFI
1TN1
1VY7
4RB5
4UY8
6OLE
1QF6
4V6S
1H4S
4V73
4V6Y
2Z9Q
5JB3
6CFK
4WQF
6CFL
4V6Z
5HCQ
2OW8
5ZLU
4V5A
5ME0
2Y14
4TNA
3J18
5HCR
5LZA
3IZT
2Y0W
4QCQ
3IZW
6NDK
5JTE
6MTC
6I7V
4V5C
3FIC
5J8B
5LMU
5LZE
1I9V
5F8K
1TRA
4WQU
6TNA
6C4I
6ORE
4V79
4V5R
6OM0
4V7J
3J12
5LMT
4V7A
5M1J
5HD1
4V4I
2WRN
1ASY
2WWL
4V5L
5LMV
4QD0
3J5N
3J5F
4WZO
5LMS
2DLC
4Z3R
4B8F
1ZZN
5LMR
1F7V
2WWQ
4BYB
6Q97
6OLF
3CW5
6OM7
4CXH
3KIU
3BBV
2Y16
6N1D
4W2E
3TRA
2Y12
4WRA
1TN2
1EG0
6HMA
6Q95
6QZP
5HCP
6MTD
3J9Y
2J00
1B23
3J55
5ME1
3IZV
4V8X
4TRA
5NP6
2V48
3J92
4V51
4V68
3KIS
2XQD
2WDG
4V69
1GSG
4CXG
4JYZ
3BT7
3JYV
U2L1XV6
2MU5DOX
6BOH
5WIS
4Z3S
5DFE
6ND6
5DOY
5J3C
5W4K
6BOK
6UO1
6OF1
6CFJ
6CFK
6SGC
6ND5
6B4V
6FKR
5J30
5WIT
5CZP
6N9F
4Z3R
5J4B
5J4C
5UQ8
5VP2
6CAE
4Y4P
4Z3Q
4Y4O
5UQ7
5J4D
1FIR
1PWF
6N9E
6CFL

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).