(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: HOZ
File name: alatis_output_compound.sdf
|
Formula: C5H12N2O2 Compound mass: 132.16050000000004 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| HOZ | 2HP1 2HOZ 2HP2 3USF |
| DAV | 4GRX 1H7O 7JDW 5HNR |
| GMA | 1B9U 2FCI 2APH 5BXU 1TWQ |
| ZGL | 4M6G 4OXD 1LOC 4KNL |
| 0W6 | 4FZC 4FZG 4HJD |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.