Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: HO3
File name: alatis_output_compound.sdf

Formula: Ho1
Compound mass: 164.9303
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
HO31W6Z
S3F4IUB
4IUC
4IUD
F3S5A4F
4S3F
4YSX
1UBO
2FBW
1LLZ
6S6S
2VKR
2FD2
2WDR
1Y4Z
5EXK
5ADU
1BC6
1E3D
2WB1
3CUR
4YDD
3AE4
1QLB
1E7P
3ABV
5E7O
6EN9
1YRQ
3AYY
6S6X
1G3O
3P4Q
6BTM
5ACN
4C3O
1F5B
1F2G
4UCW
4YTM
2BS4
5VPN
3KEF
2PMZ
4UPV
4UE2
3AE9
5NQD
3CUS
6S6T
3UTD
6MYS
1G6B
6MYQ
2FRV
5CHC
1YQW
1EA0
3AE2
1WUH
5XMJ
2WU5
1SIW
2VDC
3AE1
2WDQ
3AEB
4URH
6FPI
3AEE
1YQ3
5Y34
1BD6
1ZP0
3USE
1G8K
4UQL
4UCX
1FRJ
5CH7
1GAO
1OFD
1XER
4OV1
1L5J
6MYP
4U9I
5XVC
5XLF
1FRX
4N7B
3CIR
1Y5L
4UEW
1FRI
6GAL
4UPE
3AE7
1D3W
4UEQ
3MYR
1WUL
4UD6
1SJ1
6G94
4YSY
1WUI
6FPO
1Y5I
3PNI
7FDR
4YSZ
3P4R
3T0G
3P4S
3H3X
5Y4N
1L0V
4B1O
1UBL
1UBU
1KF6
1FRV
3VRB
2WQY
1LM1
3UQY
5XVB
3T0F
1LLW
2WP9
1UBJ
4ID8
1NEN
4MV5
4MV0
5A4M
6EHS
4UCQ
2V2K
1R27
1B0V
2WAQ
3AE5
3HKZ
1UBM
3IR6
6S6U
4AAY
4UE3
4MUY
2Y0S
3RGW
1OFE
3SZU
4YT0
1SIZ
6EHQ
4YTP
3P4P
1WTF
1FRL
3VR9
3AE6
6FPW
6FDR
3AYZ
1YQ9
3AYX
5A4I
3AE8
4KX6
3AEA
3VR8
4IUB
3EGW
6G7R
5JRD
1B0T
2H88
2WU2
4UE6
2WDV
1AXQ
2BS2
4B1P
6G7M
5XVD
3AE3
6UOI
5FD1
6A2U
1FXD
2WS3
6MYU
5XLG
1UBR
4JYE
3VRA
1KFY
2PA8
4IUD
1WUJ
1Y5N
4YTN
1FER
1WUK
4AYB
3KEM
2H89
1UBK
5MDJ
3KEL
1NEK
6MYO
1FRF
4UD2
6MYR
1UBH
1FD2
3AEG
3USC
2B76
1FF2
1FRM
5XLE
1FTC
5C3J
1FDD
5D51
5C2T
1A6L
1G8J
3IR5
1H2A
2BS3
1YQ4
1UBT
5XLH
1FDB
1FRH
5MDK
5MDL
6GAM
5LMM
6GAN
4YXD
3IR7
4TTT
3F7T
6FD1
1H98
3AEC
3DNF
3SFD
6AWF
1PC5
3SFE
4U9H
5LRY
1FDA
1F5C
2ACZ
3AED
1H2R
4IUC
7FD1
6F0K
6MYT
1ZOY
4UQP
2IVF
3AEF
4S3D
1FRK
1PC4
1Q16
JIM3KQ0
PRA1TNK
1UTL

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).