Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

Home
Process a structure file

Publication files:

Submission ID: HIO
File name: alatis_output_compound.sdf

Formula: C5H9N1O4
Compound mass: 147.12890000000004
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.64
  • Compound probability: 0.90


List of identified carbohydrate fragments:

  • C5H8N1O3
    Fragment probability: 0.64
    Fragment mass: 161.13559999999998
    Fragment main chain atoms: [5, 4, 6, 3, 1]
    Fragment all atoms: [5, 8, 9, 18, 4, 7, 6, 3, 17, 2, 14, 15, 16, 1, 11, 12, 13]



Most similar ligands:

Ligand Expo IDPDB protein complex ID
HIO1YVE
4KQX
4XDY
6AQJ
40E4XDZ
6AQJ
5E4R
HDA2GCQ
5K7X
1JUY
1CG1
1CIB
1CG0
1KKF
1KKB
1GIN
1LON
1P9B
1NHT
1GIM
1CG3
6FKO
1CH8
1KSZ
OGA4QKN
5PHQ
3HQR
5PKM
4CCK
6F4Q
4QXB
5PI1
5PJ1
5PKN
5PNR
5LY2
4BHG
5PJQ
4J25
5PJH
2PXJ
5PJ3
5PNN
4QKF
4CCM
6HGT
5PJT
5PHP
3KV5
6RK9
5PN5
3N9N
5PHX
5PH0
5PK3
5PMB
5PLT
5FWE
5PMD
5PM3
5PME
5PM4
5PJM
2Q8E
5PIF
5PJJ
4QXH
5PK1
5PM8
5D9Y
5PI5
5BKE
5LUN
5PM2
4V2V
5LA9
5PJS
5PJO
5PL5
3AVS
3O2G
5PNM
6H8P
5PKH
5PHI
3LFM
5PIO
5PI3
5PIB
5PK2
5PKC
5PNL
5PMJ
5JZ8
5PM0
6IP4
5PIW
3PU8
5PJY
3AVR
5PHB
4CCN
5PKB
5PNV
5PLH
5ZMD
4XDO
4EYU
5PI6
4Y33
4D6S
5PJC
4V2W
5PN6
5PNJ
5PJ7
5PI7
5PHF
4IW3
5PJ2
5PHW
5PLW
4BGM
3KV4
5PMO
5PLC
5PKS
4NHL
5PI4
5PHC
5PK9
5PK5
5PIT
4LT5
5PIU
4AAP
5PH8
4JAA
5PMV
5LAS
5PJD
5PNG
5PJI
5L9V
5PJK
5PLA
4GAZ
3N9Q
5PNO
5PK7
5L9R
5PKG
5PHZ
5PIS
5PLQ
5PI2
5PIM
5PJU
5PMM
5PL1
5PHO
5PLN
4NM6
5PH9
5PL3
4BHF
5PMX
2OX0
5PKD
5PHD
4IDZ
5PLK
3MS5
5PMF
1H2M
4CWD
5PM1
5PIG
5PLM
5PH5
2OQ6
5PLP
5PJZ
5PKP
5PKE
5PHV
3N9O
5PIK
5PID
5PKA
5PJ4
5PL0
5PJX
5PN3
6H9J
5PI8
5PIY
5PHR
5PNW
5PKF
4BHI
5PLY
5PIV
5PJE
4CCO
5PJ0
3PUS
5PH3
3PU3
5PLG
5JZZ
4QXC
5PKQ
5PJW
5PKO
6FQC
5PNS
5PMG
5PLE
5PN2
5PMN
4C8D
5PL8
4EZ4
5PHJ
2QRL
4Y3O
5JZA
5PHM
2OT7
6F4P
5PJG
5JZU
5PMU
5PMS
5PK0
5PH7
5PIC
2RDS
5PIZ
4EZH
6GPN
5PNE
5PLI
5PKJ
4IGQ
4BG1
1H2K
5PM5
5PIX
5PN0
5PHS
4C5W
5PJ8
5PLS
5PLJ
5PLO
5PND
5PHK
6HL6
5PI9
5PML
5PNC
5PMZ
5PKR
5PMI
5PLX
4GJY
5PIQ
5PIN
4CUG
5PK4
5PMC
5PKX
2OQ7
4Z1V
5PHY
5PLF
5PN9
5PL4
5PL2
5PMP
4B7E
5PKW
5PJ6
5PMW
5PMT
5PK6
5PHN
5PJ5
5A1F
5PNF
5PJ9
5PNA
5PLZ
5PIA
5PN8
5PMY
2P5B
5PH2
4B7K
5PKY
4NHX
5PH4
5PMK
5PKV
5PKK
5JQY
5PIL
5PLR
5PHG
5PMH
2XML
5PNK
5PNQ
5PHL
5PMQ
5PJB
5PJN
5PJL
5PLL
6F4R
5PHE
3KVB
4NRP
5PNU
3N9P
6HA6
5PLV
5FV3
5PI0
5PL9
5PNB
5PIR
5PJF
5PH6
5PIJ
5PJP
5PJV
5PKL
5PII
5PNI
5PL6
5PJA
5PNH
2RDR
5PH1
5PLD
5PMA
5PKI
5PHU
5PM6
5PN7
5PK8
6HKP
5PHH
5PNP
5PKU
2XDV
5PHT
4NR1
5PLU
3DXU
5PL7
3RCQ
5PHA
2OS2
5PM7
6HL5
4D6R
6F4T
5PMR
6F0W
5DEU
5PIE
3PUA
2XUM
3N9L
5PKT
5PKZ
5YKO
5PIH
5PJR
5PIP
4BGK
5PN4
5PN1
5PLB
6HC8
5PM9
AAC1QD8
1NG3
5AZ8

Flag Counter

Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).