Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: HGN
File name: alatis_output_compound.sdf

Formula: HG2
Compound mass: 0
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
HGN6BRI
CUA2FWL
2EIN
3WG7
5J4Z
5B3S
3S3A
5X1F
2DYR
3SBP
1YEW
3QJT
2DYS
1QNI
4GP8
6JY4
2YEV
2Y69
3QJR
6NMF
3ABM
5ZCQ
1CYX
1V55
6HU9
3S8F
3RFR
6J8M
5ZCP
1FWX
2CUA
5X19
4N4Y
5X1B
3AG3
5ZCO
5Z85
6GIQ
1XME
2EIM
6RL0
3S33
3BVD
3RGB
3X2Q
3AG1
3ASO
3S3D
3SBR
1V54
4G7Q
4G7S
3S3B
6PTY
5IY5
3QJV
5W97
3AG2
5WAU
6NKN
3ASN
5B1B
6PTT
2EIK
5Z86
5XDQ
6RKZ
3EH5
4FA7
5NDC
4G70
2QPE
4G72
4GP5
3QJQ
3SBQ
6NMP
3S39
3S8G
5B1A
4G7R
4ESL
1EHK
5J7Y
2QPD
2EIJ
3AG4
3EH3
5Z84
2EIL
6JY3
3QJU
3ABK
5XDX
3QJS
2ZXW
3ABL
1QLE
3S38
3S3C
4G71
4EV3
4FAA
4F05
3EH4
4GP4
SM5UM9
5KTJ
6NBT
4P1J
5LXR
1CX8
1YZR
2ANX
5G3S
4ZHH
5K97
5ZC0
5NSJ
2O5W
1DKH
1LT7
1R14
5KSE
2ANV
1QAT
3Q8L
1A4Z
2WJD
2X3L
4REB
2HYZ
1EXZ
4P1H
1SOI
5ZB8
1BIX
3KLT
1XR5
1QJM
1UZP
2X6C
1A3C
2O3H
3Q8K
2TCL
4AFP
2E0Y
4F3V
2VZY
1TVG
1DT6
XE1C6K
2W72
6AYK
1C6N
1UO6
2OQE
5KPU
5HW1
2XKH
2Z8Y
2B2J
4ZZC
2A7C
3S38
2W6V
3S3A
1UX9
4YLH
1C62
2A7B
3S3D
5A6V
3S39
3TFA
3G46
5C2W
5BU8
1KQN
4PWB
5HW5
2A7A
1J52
1FZH
1C3L
1UYU
5I63
4GUV
3BVD
4NXA
3PKL
1C10
5GUX
2W0Q
1K4K
1RJO
1S56
3ORD
3U52
1E9V
4O4T
3LZY
1W2Z
1RKY
1C6H
1C68
6QII
3TFE
1C6B
5NSW
1GKZ
4ZZB
4NWH
5O1K
1URY
4WNA
5O27
3PKF
2A7D
3S33
2W6Y
3S3C
3C9I
1ZDM
3FGR
3QPK
4MGH
4WN9
3PLG
3PK4
3S23
3GLN
1UVX
1U0X
3S3B
1C65
3ZJR
1I4W
3PLE
3PKH
3PLH
4L78
3TF1
3MOU
3PK5
2FIC
1W53
3CYU
3TF9
3LS7
3ZJS
1FZI
1UVY
1C1M
1C6E
3PLJ
6ASM
1L1G
2W6X
3FBX
1O75
1VAU
3M3D
3PKG
2OQU
1LLS
3FZ6
2A9R
3GK9
6FY9
2Z8A
3PLI
3PK6
1UOC
3PKK
1C6T
2W6W
1L0Z
3PJK
5M69
2DKI
2IE6
2IC0
3PLM
1FO6
1VGI
2ZFE
1NXT
AM4ZHG

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).