Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: HGB
File name: alatis_output_compound.sdf

Formula: C7H6Hg1O3
Compound mass: 338.7105
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
HGB3IBL
5FDI
1ZE8
4XE1
2AW1
1BV3
5T74
1F2W
2F14
5BYI
3K34
3V5G
5T72
5T71
4MTY
5FDC
5JQT
4QY3
3IBU
3IBI
3IBN
MBO1NAQ
4MLX
3VBD
4YXU
5W3B
4E3H
5EC5
4YXI
4JS6
6GBR
2JHN
4Q8Y
3C7P
4MDL
4FL7
3ZP9
6HXD
5THI
4E49
4YX4
4Q7W
3V7X
3RJ7
4FVN
4FRC
2HNC
1LUG
4JSS
3T5Z
3MNU
4E3F
4JSA
3EFI
3BL0
5M78
4Q8Z
4Q90
6I0W
1DR7
4Q81
3CAJ
2GD8
6I3E
2QP6
5THN
6GM9
5W31
6GDC
4Q99
4Q87
2QOA
1DR6
4E3G
6HR3
4E4A
4Q7S
4Q83
4Q7V
3M1J
2HOC
4YYT
4Q9Y
4Q78
4FVO
3T5U
6I2F
5W2K
4YXO
4E3D
4FPT
2QO8
6I1U
4Q8X
3V5G
4MLT
4Q7P
2HD6
4FU5
2HL4
5THJ
BE71ZH9
1ZGF
1ZFK
1Z9Y
6HQX
5LL8
4UXM
3KNE
1ZGE
3M04
3M1K
1ZFQ
3M2X
3M14
3M2Y
BOX
BEZ1GXS
1W9O
1YAJ
5E4D
3TGV
5DZK
2V7B
2DU8
4ZGF
2RHM
3R76
6QL3
1HZ4
2AJY
1ONI
4ZJZ
6N35
5EWZ
1W9E
3R75
5M35
3R9T
5LAK
5YOD
1KIF
3S46
3GV1
1I7Q
2M9Q
2Q38
1VE9
2Q0I
3HGI
1S9A
5HWK
1OC3
1RED
1A8U
1UKB
2F78
2M9P
2F8D
1DJR
5EXA
6CB4
4ZVC
3U1I
1RU9
1S8F
1KQB
6E43
5WP1
1HKQ
4UTX
2Q0J
2QL8
2V41
5FXF
6EF6
5TJZ
1RUK
2V32
4UTV
1UUJ
1HD2
6QGB
2O02
3R9S
5TJY
6FNC
5JIT
4UUB
6FNA
6DHB
1TMX
2Q1B
5XFI
6FNB
5JM4
1H4O
1RUP
5ZZS
5M36
6FN9
5N4T
6A0Y
2V2G
5J31
4UU8
5U4S
5DNU
2QMQ
6Q38
4F5Z
5IM2
5JIV
2AK1
1GYX
1JU4
1NCW
5M37
3IT4
6P2E
1V1T
2VL2
6Q4Q
6OS5
3F8E
4EAT
1RUM
6A1L
1URM
4XDQ
1I69
5EWU
6AWV
1RUA
1OP3
3CCF
3V1N
2OK6
5DQY
5MSD
2FP7
4UTN
4UUA
4EVR
2Q9R
3TX2
2VJ1
1RUL
4UU7
2F7A
4UTZ
3FFP
4OU1
5EM1
4MF6
3O9M
1REE
3FBW
1REF
5JOS
6AWT
4IJI
4UTR
1L7Q
6OS6
4M51
4HZ2
3RHG
6OTL
5DNV
1W9Q
3V7P
2Q6U
1WSP
4PBH
3IEO

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).