(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: GTQ
File name: alatis_output_compound.sdf
|
Formula: C7H6O4 Compound mass: 154.11990000000003 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| GTQ | 3JUT 4E3D 3NW4 4FAG 3NL1 |
| DNA | 3I64 |
| DBH | 1L6M 4E5L 3U0D 3TF6 3T1D 3CMP 3I0A 2WHY 3BY0 3K3L 3SAO 1MDB 1MD9 |
| 3HB | 3PCB 5I7I 5A3K 4Q6W 5HPI 4BK1 2DKH 4PAI 6O9A 3TUS |
| BIK | 1U5C 1U5A |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.