(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: GOG
File name: alatis_output_compound.sdf
|
Formula: C8H6O5 Compound mass: 182.13000000000005 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| GOG | 6DJI |
| PF0 | |
| GJS | 6DIH |
| GTQ | 3JUT 4E3D 3NW4 4FAG 3NL1 |
| DBH | 1L6M 4E5L 3U0D 3TF6 3T1D 3CMP 3I0A 2WHY 3BY0 3K3L 3SAO 1MDB 1MD9 |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.