(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: GK8
File name: alatis_output_compound.sdf
|
Formula: As1C6H13N3O4 Compound mass: 266.10620000000006 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| GK8 | 4GK8 |
| HSO | 4V8Z 4BYX 4BYR 1KMN 2BKD 5VLC 5YHT 4V8Y 1KAE 4GYF 1H3J 3UMU 2FPU 5EQ8 3ATW 3AVZ 3AW0 |
| HIS_LFOH_DHE2 | |
| HIS_LFZW | |
| HIS_LFOH_DHD1 |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.