• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: FZS
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 0.50
• Compound probability: 0.58

List of identified carbohydrate fragments:

• C₈H₉N₄O₃
  Fragment probability: 0.38
  Fragment mass: 197.17099999999996
  Fragment main chain atoms: [3, 7, 16, 11, 10, 19, 24, 2]
  Fragment all atoms: [3, 32, 33, 20, 42, 7, 37, 12, 38, 18, 16, 11, 21, 10, 8, 5, 36, 17, 19, 24, 2, 29, 30, 31]
  

• C₅H₅N₂O₂
  Fragment probability: 0.38
  Fragment mass: 152.13049999999998
  Fragment main chain atoms: [3, 7, 16, 11, 10]
  Fragment all atoms: [3, 32, 33, 20, 42, 7, 37, 12, 38, 18, 16, 11, 21, 10]
  

• C₄H₅N₂O₂
  Fragment probability: 0.45
  Fragment mass: 124.12039999999999
  Fragment main chain atoms: [3, 7, 16, 11]
  Fragment all atoms: [3, 32, 33, 20, 42, 7, 37, 12, 38, 18, 16, 11, 21]
  

• C₂H₃N₁O₁
  Fragment probability: 0.50
  Fragment mass: 97.072
  Fragment main chain atoms: [2, 24, 19, 10]
  Fragment all atoms: [2, 29, 30, 31, 24, 19, 10]
  

• C₂N₁O₁
  Fragment probability: 0.20
  Fragment mass: 66.0382
  Fragment main chain atoms: [10, 11]
  Fragment all atoms: [10, 11, 21, 16]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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