(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: F9N
File name: alatis_output_compound.sdf
|
Formula: C23H33N7O3S1 Compound mass: 487.61690000000016 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.20
- Compound probability: 0.09
List of identified carbohydrate fragments:
-
C2H6N1
Fragment probability: 0.20
Fragment mass: 72.10870000000001
Fragment main chain atoms: [1, 30, 2]
Fragment all atoms: [1, 35, 36, 37, 30, 2, 38, 39, 40]
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| F9N | 6H0O 6GT1 |
| N76 | 1OIU |
| 4SP | 2C6O 6BSS 4EOK 2IW9 1H1S 4EOR 5LQF 2IW8 5M57 |
| 55S | 5CYI |
| 2A6 | 1H1Q |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.