(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: EVI
File name: alatis_output_compound.sdf
|
Formula: C3H4N2O2S2 Compound mass: 164.2059 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| EVI | 5JGT 3S77 |
| EVF | 5JDV 3S73 5JG5 5JES 5JGS 5JEG 5JEP 5JG3 5JEH 5JE7 |
| ZEC | 1ZFQ 3L5U |
| EZL | 6MWI 5TT3 5JN9 3DCW 6BCC 3MDZ 6QL2 3CAJ 3DD0 |
| 1QV | 4KAP |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
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- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.