(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: EDN
File name: alatis_output_compound.sdf
|
Formula: C2H8N2 Compound mass: 60.098 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| EDN | 3X00 2XY5 5XF6 4XYY |
| NEH | 3PHX 3O65 1YY2 3IHP 4EV2 6PGV 4FJV 3PHW 3POJ 5LRW 2IBI 3I3T |
| 4G6 | 2NBL 2N6H 2N4N |
| NTB | 1MTB 2FGU 2FGV |
| NPT |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.