(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: E43
File name: alatis_output_compound.sdf
|
Formula: H2O40W12 Compound mass: 2848.0718 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| E43 | 4BVO |
| KEG | 5SUQ 5XLS 1N7D 2HHL |
| TEW | 4PHI 4OUA 6G3R 6G3S 6N90 4Z12 4Z13 |
| WO2 | 1I95 1I96 1I94 1I97 1FKA 1DV4 |
| HFW | 5FHW |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.