• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: E17
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 0.42
• Compound probability: 0.38

List of identified carbohydrate fragments:

• C₂H₃
  Fragment probability: 0.38
  Fragment mass: 85.1471
  Fragment main chain atoms: [2, 40]
  Fragment all atoms: [2, 60, 61, 62, 40]
  

• C₂H₃
  Fragment probability: 0.38
  Fragment mass: 85.1471
  Fragment main chain atoms: [3, 40]
  Fragment all atoms: [3, 63, 64, 65, 40]
  

• C₂H₃
  Fragment probability: 0.38
  Fragment mass: 85.1471
  Fragment main chain atoms: [4, 40]
  Fragment all atoms: [4, 66, 67, 68, 40]
  

• C₁₁H₁₅N₃O₃
  Fragment probability: 0.42
  Fragment mass: 213.25290000000004
  Fragment main chain atoms: [5, 41, 34, 37, 44, 30, 33, 39]
  Fragment all atoms: [5, 69, 70, 71, 41, 6, 7, 72, 73, 74, 75, 76, 77, 34, 112, 46, 37, 52, 44, 30, 109, 24, 102, 103, 28, 33, 111, 50, 118, 39, 54, 48]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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