Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
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v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: DOX
File name: alatis_output_compound.sdf

Formula: C4H8O2
Compound mass: 88.10480000000004
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
DIO2WC0
1ZRF
2DCY
1V93
4J64
5OGI
2OFP
5O80
3N56
2W83
1P9S
5NIW
1AF4
4UBV
3E4A
6N2H
2GNV
1KXG
3VZP
3VAF
1Y66
1FV0
2JG4
3VAJ
6EDS
3CWW
4TU7
3H44
1LVO
2C03
5O7Z
2J59
1TGJ
5A04
2BIS
5BN3
3WEU
4LWY
4TU9
3VAI
5VJ2
3EWG
5NIT
5MJC
6K63
3OPZ
5O1K
2XH6
5Y9Z
2JBU
1WMD
3EE5
4GRU
3EUY
2HVW
5HR5
1TG6
2AHJ
3OFI
3QQR
1DC1
1T56
6H6C
3VAH
5OFY
2HJS
5VSD
1ZT5
4MPI
2FWV
6HK8
2G47
2G56
4UFN
3UWC
3VAM
3KE4
5O9J
3ACD
5DN2
2WLY
1G29
5XN7
3V3Y
3WOC
4H7R
1PUU
1WMF
2G4B
3I4D
3ACC
2AH9
4COS
2JC5
4DN9
4TU8
3M0W
2DOH
4CBW
3VP9
5JQS
6H5Z
2J3S
2JEN
4BE4
5VI6
2JGP
3LXH
2G54
4K6X
3TEU
2AE7
2PI2
2G48
1H0A
5VSF
2C0N
5EV2
3VAG
6H1L
3TLK
4CO9
3VAL
2DCZ
3ACB
5I3M
2G49
5Z7Y
3VAK
3ZCI
1KMQ
2OUA
1TW1
1UB0
5HCC
6ELA
5A03
1ZT3
1UIY
3V3Z
3NPE
1TW5
2WLZ
1V19
5ETE
2VQJ
4O35
3OC8
3N98
2WM0
2G9H
4NXO
4UZ3
1YPQ
5L6P
1WYK
1O0R
3S4C
2NG1
6MJ7
1VIS
5L6O
2AEC
4AGJ
1KKH
4DOD
2AGD
4DOE
2AES
5BMQ
1BFU
1OJR
3WEV
6Q5N
4JKX
DOX
ETX5OV9
5A8K
6CJ6
2FD6
4J30
2VZY
5LTE
3E49
2WNZ
1R37
4F3D
6IHD
5OIC
3KNZ
3DT7
2HX5
4J32
2Y2V
4OX2
3BYB
5NUE
3BBY
5OIR
2GNO
5OIM
5A2D
4V3F
2D1G
2R7H
3GBN
5OIL
6HB8
P336AOM
4XWL
4EC4
3FFR
2AJS
4POP
6MLS
6OL9
6ASP
4W8O
6HOS
5NIR
3B1Q
5UTU
5L8N
3CC1
2F1F
4KL9
2AAW
1VG9
4HS7
6CJ6
4M6Z
6H7D
6FUV
6I7I
5XAW
3A9F
2VLH
1WMA
3FKH
6C5B
3RJD
6MXT
1T0T
4BGU
4G61
6MO3
4U6T
6AOL
4XJY
6DYT
3F7G
5J81
4ZCS
6DXY
3CMB
6MPD
1ZZM
5NQD
3FD3
1Y4L
3TGW
6JU1
4XVX
2I02
4KVJ
6ECG
2IZ0
2HR7
4Z5Q
3KLT
6DZ5
4KR5
3BHJ
2IZ1
3QNL
3R56
2VLF
6QF3
4MN3
6CSY
6MQQ
6F9V
6MME
2AOA
5ZB2
4N4D
1OXN
3UTO
6DUR
6DVX
1OY7
2YCP
2YHK
4KIH
5L2V
2YCT
5L8I
4RLJ
3ZKK
1OXQ
3H4Q
2AFV
6H2Y
2Y2U
5LKJ
4INN
PG04ODT
4RX5
6FUL
5C3D
5AAN
5E5S
2WYI
6CJ6
5HLR
3SWI
4N4D
5J06
3IT0
4I0U
4AJ0
5CTJ
6HHE
4C4A
5JEI
5C4C
5OV9
3CN9
5FUM
5FUS
4I4D
4MHW
3Q1I
3ATU
3P53
5MOL
5HSS
5YVL
4R36
6CF9
5O6Y
5FOQ
4A5G
3IPO
4YK5
5E5P
4MUU
5BQE
3LO1
5ZB2
5EYI
3ZLT
5CUI
5C4E
5C47
4G62
6GSZ
2Y23
4E9C
5UQD
5N84
4R2Z
5E67
6FSE
5VGO
3UCX
4PT1
5XEM
5J0B
3IT1
6G1Z
5EJ0
5JLP
5C7T
4POV
5N78
5N77
4MAD
3TGW
5ZZ0
4MES
4POP
2VJI
5GNL
6G20
5EYG
6H2V
5NS9
3TZZ
3A4G
6HUR
5E63
5C4D
5Z2L
5DD2
5LO7
5CFS
4XUX
5FQQ
4NEO
6C5I
6EPA
6H27
5WY9
5FQI
5C7Q
5C1G
5JLR
4X22
2CU9
6FUK
4II2
5UKV
4KR5
5KUP
4Z7J
6FSD
3TIV
4R37

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).