(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: DFB
File name: alatis_output_compound.sdf
|
Formula: C7F2H6O1 Compound mass: 144.11850000000004 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| DFB | 1MG0 1QV7 |
| PFB | 3OQ6 4NG5 5KJ6 6OWM 6O91 5CDT 5CDS 4NFH 4DWV 5KJ1 5KJE 5CDG 5KCP 5KJC 1MGO 1HLD |
| 341 | 3EON |
| 24B | 1QV6 |
| 3U4 | 4RM2 |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.