(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: DDO
File name: alatis_output_compound.sdf
|
Formula: C6H13N1O3 Compound mass: 147.17180000000008 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| DDO | 1JSL |
| LDO | 1JSR 6IR7 |
| UN1 | 5K2M 6O4G 3WWL 5EIN 6O4I 5TWW 1H0G 1WAW 4ZUL 6O4F 6HNV 5TWI 1W9U |
| 11C | 3PWS |
| 2JN | 6KZU 4UD7 4UE1 5ZJY 4N7Y |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.