(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: CP3
File name: alatis_output_compound.sdf
|
Formula: C36H44N4O8 Compound mass: 660.7547999999978 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| 1CP | 1R3Q 1R3S 1R3V |
| CP3 | 2Q71 1R3T 1R3W 1R3Y |
| UP2 | 2YBQ |
| 7J8 | 5M6R |
| DPM | 4MLV 1GTK 4MLQ 1PDA 1YPN 3EQ1 1AH5 5M7F 3ECR 5OV5 5H6O 2YPN |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.