Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: CMO
File name: alatis_output_compound.sdf

Formula: C1O1
Compound mass: 28.0101
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
CMO1MKO
6N02
6IHX
1VRE
2GTL
2KII
1MZ0
1SDK
3S65
3UHI
5O41
1YCA
3AG2
5URC
2R4Z
2KIL
1SCT
3F46
1G0A
1LA6
5LFG
3QJU
1X9F
3W4U
1NIH
1YFF
4HRR
1LSV
1YZI
2ZSX
4JYQ
2BLJ
2G0V
3UHE
3UGY
1MYF
4DWT
3QJR
1VRF
1GCW
3ECL
5UFJ
4G98
2G0R
2R4W
2AV0
2G6O
6DI4
3AYY
2ZSN
5MWU
2DN3
2ZSR
3UHG
1QSI
1M9P
3S66
2YLG
1NXF
3DAG
2G10
4O2G
4GZG
1W4Y
2YL0
3G4Y
2G14
1J3Y
1T87
5BVH
1J41
1JEB
1J7Y
1HAB
6I40
2Q0M
1SI6
4MQK
1MWC
3HSN
3DAF
4G7P
1YVQ
1SPG
5JML
2G6N
3NL7
1JWN
1MYM
1M6C
3D17
1MYZ
1UBK
1OUU
1ULX
1ABS
1CH4
5B3S
2OWJ
1COH
1OCO
1LJW
3ZWI
4MQJ
5W97
2MB5
5U3I
2GRZ
3G46
2YP5
1SDL
2ZSQ
4MQC
1XJ4
3UHC
3E5O
3UGZ
1AJ9
2ZT4
6BWU
1ECO
3QJV
3E4N
2AUO
1V4U
7HBI
3PI8
3KAM
6OP1
4TKV
2YL7
2ZT0
6HAL
1G0B
3HXN
6I3T
3QJQ
1J3Z
2ZT2
1DWS
3PIA
2YP9
1BBB
2QSS
3ZTM
3GKV
2MGA
3EDB
3UHB
5JRX
2VV8
3WFC
3G4V
1E86
3ZTZ
3PI9
5E83
3UH6
6H6J
3QM7
2G12
1IT3
1A9W
5CN9
1PBX
3NML
1HCO
1IRD
2SPL
3G4W
1F5P
6H6C
4YNR
2ZSS
1DXC
2BW9
4MQG
3QJT
4G8P
1G08
4NI0
1HBG
3QJC
3UH5
1NWN
1MLQ
3VRF
1T85
2YL3
1NEJ
1JZL
5JMG
5CND
5X1B
4UWN
1MLF
5L8D
3AYX
1GDI
1UBL
5CNC
2HCO
1G09
2ZSZ
4ESA
2BWH
5E9R
1DY7
1GWD
2YLD
1DO4
6II1
1IX4
5HBI
1W92
3A9M
1DWT
5E6E
1E08
3QJB
5X1F
2LQD
1SPE
3F47
1UBJ
2YL1
1HFE
3AG1
3SDH
2ZT3
1VXF
4F6J
3M0B
1R1X
2G0X
2AUQ
3UHD
1IWH
1HAC
4F69
2G0Z
2MGC
3G4R
3UH3
5CN6
1DXD
2GRH
2Z8A
5X19
4G99
1RVW
3G4U
3AYZ
1I3D
1UBR
2O0G
4F6F
2D5X
1MLU
1CG8
2XJW
3UH7
2ZST
3ZQY
5CMV
5CNF
3ED9
1YVT
5CNE
6BNR
3ECZ
2MGF
3QJS
5WAU
2R4X
1P3V
5SW7
3CPP
2L8M
3G52
4G7U
5KKK
1MLM
3ECX
4NI1
1JFC
1BZR
4IRO
1GX7
3MLJ
2ZSO
2G0S
5CN8
3UHH
1CBM
1MBC
5M3R
4DWU
3MIF
1DO1
2Z6N
1DWR
1FSX
3AG0
1MCY
3PXT
4UWU
5CN5
1J40
4G7T
2G11
1MOC
3GLN
4O35
3V6Q
1A6G
1UBO
3G4Q
1DO3
3E5I
2ZSY
5JOM
2ZT1
1T1N
5CNG
3D1K
1JW8
3H65
1MLJ
3E55
1K1K
2MGK
4UWV
2G6M
6MV0
1AJG
1AJH
5CN7
3G53
1YWC
6N03
2ROM
4U9G
1VXC
1UBH
5GEP
3MM7
2HKX
5CN4
1DO7
3CF4
1XJ2
5CNB
3A5G
2ZSP
1YWA
4AVD
3EDA
PTW3MNN
1DB2CFU
HDS1LPO
1QZ3
1QD6
1EXW
1LPP
1LIC
DSC1LPN

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).