• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: CE3
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 0.50
• Compound probability: 0.50

List of identified carbohydrate fragments:

• C₆H₇O₂
  Fragment probability: 0.46
  Fragment mass: 69.0817
  Fragment main chain atoms: [3, 28, 6]
  Fragment all atoms: [3, 37, 38, 7, 4, 11, 39, 40, 28, 6, 1, 31, 32, 33, 22]
  

• C₂H₃N₁O₁
  Fragment probability: 0.50
  Fragment mass: 97.072
  Fragment main chain atoms: [2, 27, 20, 9]
  Fragment all atoms: [2, 34, 35, 36, 27, 20, 9]
  

• C₂N₁O₁
  Fragment probability: 0.20
  Fragment mass: 66.0382
  Fragment main chain atoms: [9, 12]
  Fragment all atoms: [9, 12, 23, 19]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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