(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: BYZ
File name: alatis_output_compound.sdf
|
Formula: Br1C3H3N2 Compound mass: 146.97320000000002 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| BYZ | 5CYQ 5CXR 6Q3C 4KAH |
| PZO | 5CDU 6QA3 1N8K |
| 8PQ | 5N7U |
| 4PZ | 3E4E |
| PYZ | 5CYM 1DEH 1HSO 1ML7 1HDY 1N4G 5CW1 1N92 6Q3B 1HTB |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.