• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: BIV
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 0.55
• Compound probability: 0.33

List of identified carbohydrate fragments:

• C₅H₁₁O₁
  Fragment probability: 0.55
  Fragment mass: 56.105999999999995
  Fragment main chain atoms: [2, 30, 3]
  Fragment all atoms: [2, 39, 40, 41, 30, 17, 72, 73, 7, 54, 55, 35, 89, 3, 42, 43, 44]
  

• C₅H₁₁O₁
  Fragment probability: 0.55
  Fragment mass: 56.105999999999995
  Fragment main chain atoms: [4, 31, 5]
  Fragment all atoms: [4, 45, 46, 47, 31, 18, 74, 75, 8, 56, 57, 36, 90, 5, 48, 49, 50]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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