Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: BF4
File name: alatis_output_compound.sdf

Formula: Be1F4
Compound mass: 85.00580000000001
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
BEF3P9D
2WF8
2M98
5LWK
6OPC
6IS1
4HLQ
5T45
3MYY
6EKH
5JJL
4V94
4TYY
3OLX
6OAA
4E7P
6K7L
5EUL
5UIE
3GLI
1L5Y
6DUQ
4LDZ
6G0L
2ZBE
3PUX
4APK
4DBQ
3P9E
4PKO
2FLW
5OPX
4V8R
5Z3V
1F4V
4D8Q
5Z3T
5HEV
6PEK
5CLL
4ZNL
5E3H
4AOL
2WFA
1KRX
3A0U
6BR7
3GLF
3KQU
3OLY
4J0B
4AXX
5I0H
4V81
3FFX
1NNE
4PKN
1BR4
2WF9
4D8R
4HL4
3ICE
3H1E
2WB4
3W9S
6PEN
2PL9
6OMB
1MMD
4UMV
1KMI
5JJK
5BQ5
6OAB
1FQW
5VHC
5DKF
3HB0
3DIN
3BRW
4D6Y
6IRN
4S04
6BMF
2R25
5SUP
6OO2
5JJI
2VAS
4HNS
1MIH
1ZH4
5DGC
4LX0
3OLV
2VUI
4NIC
3GLG
2A9O
5N2N
5YEW
3ECC
3DHF
3FFT
1J56
6FWS
2ZBF
4S05
5O2L
4LE0
4NCJ
5IUN
3RVL
6EBR
1XHF
4TYW
1ZES
3DKL
6NDY
2FMH
5HE9
3O8D
4I1O
6QID
1LVK
3FGZ
3NNS
3RVJ
5LTJ
4ZMS
5OJZ
5XJB
6AP1
3O8R
3RVN
4BX2
3OLW
3A10
6QIE
5D2C
6JYL
1W9I
6IRM
4TZ6
1W9K
2BEF
4IGA
5ELX
5O9G
2FMK
5EYN
5JCZ
3B9B
5O8Z
6GEN
1W0J
5LTK
4ZMR
3C7N
4IF4
2VB6
3NNN
3FFW
2VKQ
5DXI
5TTH
2PL1
6GEJ
3PEY
3KQN
3F7N
3I61
4TYN
3AR9
3TMI
2FKA
2A9P
3RVP
6EB7
6ITC
4TZ0
4PU9
5Z3U
2V0N
3PEW
6K1P
6FTX
1W7J
5LTA
1KK8
6OAQ
BF41XHF
1L5Y
BF21L5Y
4UKD
1XHF
F2UVN
2WSL
6QDY
5FXB
5NAI
6D0J
4Q3K
6JIM
6B2D
5K91
2AU9
6BX5
5KOM
4KKL
4F60
4X30
6BX4
4KK8
6B24
1LH5
6BQO
4X00
1T5G
2Q9P
1E6A
5VEJ
6D0K
5A41
2AKZ
5XD5
5XB2
5NKQ
2DQZ
2WVG
5EVC
6B2B
6RIL
6B2A
5A43
4JB4
2XMC
3SSV
2HAW
4KJQ
3MBA
2QFP
4EN5
2Z5Z
2AUU
6RII
6RIK
4GOA
3VRS
6L3Z
6EVH
6RI6
4ENB
6HOO
2LH5
3PPM
1BS3
5KBN
4CEX
2AU6
6RI8
6A24
3HQ2
6RI4
4ENC
4ENA
6D0N
1NEL
0BE4P4K

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).