(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: ASN_LFOH
File name: alatis_output_compound.sdf
|
Formula: C4H8N2O3 Compound mass: 132.11760000000004 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| ASN | |
| ASN_LFOH | |
| ASN_LFZW | |
| DSG | 6BEU 5N8J 2RQO 4GLU 6BE9 5KWO 2KQL 2JUE 2IH0 2LBZ 4OIK 2IGZ 3LNJ 1T5N 5E5T 5GOH 5HHC 1XT7 5CGO 5JBV 5GOC 3TPX 5GOI 1T5M 5X3M 5GO7 5CGN 4GLS 3BOG 5I1S 2Q33 4TTM 5HHD 5GOB 4TTN 5XDP 5GOJ 5JBY 5I1N 5J8P 3UE7 5E5Y 5I1P 4OIJ 5GOD 4GLN 5I1O 5GOK 6KZF 5XPK 5GO8 5GOG 5X3O 3TRY 3V0X 6KZU 3TRV 4TTO 3TJW 4OXD |
| ASN_LEO2 |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.