(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: ARI
File name: alatis_output_compound.sdf
|
Formula: C8H14O4 Compound mass: 174.1938000000001 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| ARI | 6J0I 5YZE 5ES0 1D83 1VAQ 5XJW 5XEW 5ERZ |
| ERI | 1EKI 5ES0 1EKH 5XJW 5YZE 5XEW 1VAQ 6J0I 5ERZ 1D83 |
| 2GL | 1EKH 5XJW 1EKI |
| 1AR | |
| 9R2 | 5OCE |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.