(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: AIC
File name: alatis_output_compound.sdf
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Formula: C16H19N3O4S1 Compound mass: 349.404 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| AIC | 3NDV 1NX9 3ITA 3KP3 4GCP 1H8S 2RDD 4KR4 2EX6 |
| PN1 | 1UNB 1W2N |
| PNN | 3KP2 1FXV 5KMW 1UOF 3HUO 1GM7 1UOB |
| NDV | 3NDV |
| AIX | 3ZG8 5ZQC 5HL9 3ITA 3N8L 2EX6 3A3I |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.