• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: AH0
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 1.00
• Compound probability: 1.00

List of identified carbohydrate fragments:

• C₈H₁₂N₁O₅
  Fragment probability: 1.00
  Fragment mass: 218.18350000000004
  Fragment main chain atoms: [7, 11, 19, 6, 8, 9, 5, 34, 2, 13, 12, 14, 31, 35]
  Fragment all atoms: [7, 30, 11, 33, 17, 19, 6, 29, 3, 26, 27, 8, 9, 32, 18, 5, 34, 2, 23, 24, 25, 13, 12, 14, 31, 35]
  

• C₃H₅O₃
  Fragment probability: 0.98
  Fragment mass: 89.0698
  Fragment main chain atoms: [10, 4, 1]
  Fragment all atoms: [10, 15, 16, 36, 4, 28, 18, 1, 20, 21, 22]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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