(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: AGI
File name: alatis_output_compound.sdf
|
Formula: C15H10O5 Compound mass: 270.23650000000004 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| AGI | 5AUV 3CF9 4DER 5I2H 5UQT 4HKK 4WO0 4DGM 3AMY |
| 57D | 4DES 3EBO |
| LU2 | 4QXV 4HKN 5NDF 4DEW 3SZ1 5AUU 4QYA 5II2 6M8A 4DGN |
| MYF | 2O65 |
| 3WL | 4X2A |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.