Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: AF3
File name: alatis_output_compound.sdf

Formula: Al1F3
Compound mass: 83.97670000000001
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
ALF3ZS9
3ZQ6
3CMX
3CMT
5O6E
3C7K
3SR0
2IHB
4ESV
3D7M
2IK8
2B8W
5CA9
5DO9
3AR8
3CMW
2F90
6DJQ
4C7O
2GJ9
1N2C
6HPU
1M34
2ODE
3B9R
1BR1
6L3G
5FHD
2XZO
4HNA
5O6R
3BH7
1ZCA
3WGU
4IYN
1TX4
2WOJ
3QPW
4GNK
3CMU
2ZBD
4C4T
1SHZ
1GFI
1L7N
5XA8
4ANJ
6K7N
3SS8
5AOR
2CNW
1TAD
3PUW
5NCO
1Z5B
5E4F
1FQK
2GTP
2X2F
1BR2
2WF6
2YBE
5JBG
3EF0
3RFU
3I62
4IDO
4OI1
2PZ3
4QJ5
5FHH
4IDQ
2GJA
1G18
3T34
3OHM
4OI0
5M70
3AB3
1RK2
2V4Z
1FQJ
4EKD
5OK2
6K7M
5O6B
1T5T
3KQL
3W6P
6GQB
6I03
2GJ8
6JXJ
2WZC
5XAA
3WGV
2BCJ
5JCP
2WF7
2ZJY
1W9L
5FHE
1MND
5JB2
2RGN
4UXR
3CX7
4EKC
2X2E
2Y3I
6HEG
1XP5
3N5K
4BYG
6K7K
4UY0
1H8E
5VHD
2XZL
5JAJ
2ZBG
2I7D
6GKH
1OH9
6DUE
1QF9
4QJ4
2G83
3T12
6B9F
1AGR
4HQJ
1W9J
5FHF
5ND4
1SVK
5XA9
4UMW
4QJ3
AF31RLT
2YNM
5FTE
3SYN
1SVT
6KS6
1KDN
4FMC
1VFX
4NST
4FMD
5UKD
5LIH
6NJO
6NJP
1K5G
5XJA
4M8N
1PCQ
3CF1
5C2K
1A6E
4FME
2F48
4CK7
2G08
4NU1
1KH5
3HB1
5GZA
2B92
1IHU
1WQ1
3RUW
3LVR
1N6K
4FMB
2G77
2HF7
1K3D
1HE1
2D33
3LVQ
4IRU
5Y6M
4CK6
1L3R
4A36
6I4I
1E2E
6QP0
5EFQ
4XPZ
2NGR
1K3C
3UKD
1E1R
3EX7
2WZD
4JVS
1L7N
4DL8
1TUY
1G4U
1KHJ
5C2J
1GRN
AL1XLG
1XLM
6JIM
2D3I
1XLH
F2UVN
2WSL
6QDY
5FXB
5NAI
6D0J
4Q3K
6JIM
6B2D
5K91
2AU9
6BX5
5KOM
4KKL
4F60
4X30
6BX4
4KK8
6B24
1LH5
6BQO
4X00
1T5G
2Q9P
1E6A
5VEJ
6D0K
5A41
2AKZ
5XD5
5XB2
5NKQ
2DQZ
2WVG
5EVC
6B2B
6RIL
6B2A
5A43
4JB4
2XMC
3SSV
2HAW
4KJQ
3MBA
2QFP
4EN5
2Z5Z
2AUU
6RII
6RIK
4GOA
3VRS
6L3Z
6EVH
6RI6
4ENB
6HOO
2LH5
3PPM
1BS3
5KBN
4CEX
2AU6
6RI8
6A24
3HQ2
6RI4
4ENC
4ENA
6D0N
1NEL
FLO

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).