(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: 9SB
File name: alatis_output_compound.sdf
|
Formula: Br1C2H5O3S1 Compound mass: 189.02810000000002 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| 9SB | 5ODQ |
| ESA | 1F9P 1RDF 2H0Y 6J5S 6J5Z |
| TSM | |
| COM | 4RQX 4RQR 5ODI 5A8R 3M1V 4AY8 1HBU 5A8W 5ODH 5A0Y 4POL 5ODR 3M30 3SQG 1MRO 1HBN 4TT7 4POM 3M2R 3M2U 3M2V 5N2A 5A8K 3POT 3M32 4POK 1E6V 1E6Y 2C3D 5N28 5AXR 5N1Q 1HBO 2C3C 3Q6J |
| TAU | 5AVF 3V39 6EDH 1OTJ 2BJF 3UYW 1GQW 4FCF 6J64 1GY9 4FOQ 4M8O 1OS7 2BZ1 |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.