(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: 9LQ
File name: alatis_output_compound.sdf
|
Formula: B1C21H24N3O4S1 Compound mass: 425.308 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.00
- Compound probability: 0.00
List of identified carbohydrate fragments:
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| 9LQ | 6I2B 5OT3 6I2D 6EMD 6EMC 6EGW 5O5M 5OL3 |
| BVZ | 6ERT |
| AO8 | 6I2H 5OUC 5OTG 6EME |
| M77 | 2ESM 3TKU 5O0E 6I2A 2F2U 2GNI 6EMB 6EM2 5LCP 6ERS 6I2C 5VEF 5NW8 5OK3 6ERW 1Q8W |
| 7K7 | 5M71 |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
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- The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.