(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: 942
File name: alatis_output_compound.sdf
|
Formula: C16H20N4O3 Compound mass: 316.3542 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.50
- Compound probability: 0.17
List of identified carbohydrate fragments:
-
C2H3N1O1
Fragment probability: 0.50
Fragment mass: 79.0799
Fragment main chain atoms: [2, 19, 15]
Fragment all atoms: [2, 27, 28, 29, 19, 15, 22]
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| 942 | 4B42 |
| N5Y | 4ASY |
| BZ0 | 4B2W |
| NWL | 4B3U |
| NIQ | 4B2X |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
Disclaimer:
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- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.