Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: 8NE
File name: alatis_output_compound.sdf

Formula: C8F3H8N2
Compound mass: 189.15740000000005
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
FBF3PCW
4YCT
8NE5N3D
00S6HZA
6HLE
4OMD
4OMC
6EQV
4RYD
5JXH
6HZB
6EQW
5JXJ
5ZOB
6HZC
6HZD
6EQX
6HLB
6HLD
BEN3UY9
2Y8D
1NSA
5E8B
3M7O
4EMN
1EAX
2GLP
2CKR
4D96
4IE2
4NCY
4D8W
4UEH
4UQW
2E58
3TAY
1NKZ
2O8U
3DP0
5M92
4IXU
1WRI
1J16
6B6S
4D9E
2GLM
5M2G
4UQU
1BTY
2Y5Z
3ED0
3CF8
3T25
4IXV
1ANC
5UNI
4I8K
4I8L
1TRM
3BCX
4D9B
4EDK
1V2V
3ITI
3MXN
2GLL
6B6O
1V2M
6SKC
5AUK
5T3H
6B6T
3D04
1OSS
3DP2
3MFJ
3PWB
1W80
3P70
2ZPS
3DP1
3DOZ
2BPQ
3RXU
5OBI
2ZIQ
1J8A
1L2E
5C50
4COF
3T28
5FXL
4D99
3BEU
4E2K
3ZSN
1J15
3B3J
4NFE
5VNX
4D9F
4D8T
3T26
4I06
3B7J
1CC7
4E3Q
2AIQ
2AER
4D97
4HZE
5JT2
4EDR
6BCS
4IE3
3D49
5M8Z
1LR4
2ASS
3DOY
4EDG
3TH2
3RXE
3ATL
4D92
6GX9
3BB8
5CAJ
2GNN
3WJP
4I8G
2ZFQ
2OXS
3P8G
3WJR
3DP3
5M90
1ANB
3GY7
2ZPQ
4EDT
1ZHR
2CKS
3NQV
4P1H
2PKA
1BRA
5M8W
2VZB
2AYW
6B6Q
4UR0
3WJQ
5MAA
4NVC
1ZHM
1V2U
1DWB
2Y46
3W5S
1J14
1V11
1V2J
5M8X
6MX9
1CC8
2AST
4UR1
3RXV
1S0R
6B6R
1BIT
1ANE
3PLB
3MI4
4IBL
3UNR
2BLW
5F6M
6B74
3T29
4I8H
1RTF
4KPM
6FID
6AVL
2BMV
3PTB
3BG8
1V16
6B6N
5JSM
1A0J
1V2S
4TPY
2ZPR
5M91
3CF9
3TPK
3VYW
4N8Z
1LO6
4DSO
4D9C
1AND
4I8J
2ZI2
2OQ5
2BLV
2J9N
2EEK
4JPU
4EQM
1ZHP
1DPO
2VJ0
4EE1
3NQ8
1V2L
1H4W
3QK1
3RXQ
1JBU
3T27
3UNQ
2TRM
6PTQ
1CE5
4XV8
5OBP
5M8U
2TIO
1KLI
6DZF
1LPU
4JNN
1MBQ
3I78
1V1M
4YTA
2TBS
4EDV
6B6P
5MA2
BAM5NVJ
5MO0
3PCZ
2BY8
5YX6
5JD4
5PB1
4IZX
2PSM
6Q37
2ANW
4P9H
2BY7
4J2S
1C1N
2BY6
6Q39
1TIO
1XX4
1C5P
2BY5
1ZVW
2BY9
4XN6
1HJ8
6I44
1F5K
3PVK
1C5O
2ANY
5Z87
5MNH
5MNG
1C5Z
6JO2
5AUI
4OMR
5MOQ
2BYA

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).