• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: 8B7
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 1.00
• Compound probability: 1.00

List of identified carbohydrate fragments:

• C₆H₁₁O₆
  Fragment probability: 1.00
  Fragment mass: 179.14750000000006
  Fragment main chain atoms: [11, 12, 16, 30, 6, 14, 48, 25, 62, 49, 26, 63, 53, 28, 65]
  Fragment all atoms: [11, 12, 16, 30, 6, 43, 3, 39, 40, 20, 57, 14, 51, 32, 48, 25, 62, 49, 26, 63, 53, 28, 65]
  

• C₆H₁₀O₆
  Fragment probability: 1.00
  Fragment mass: 178.13960000000006
  Fragment main chain atoms: [10, 8, 5, 31, 18, 15, 24, 47, 61, 45, 22, 59]
  Fragment all atoms: [10, 8, 5, 42, 2, 37, 38, 19, 56, 31, 18, 55, 32, 15, 52, 33, 24, 47, 61, 45, 22, 59]
  

• C₆H₁₁O₅
  Fragment probability: 1.00
  Fragment mass: 163.14810000000006
  Fragment main chain atoms: [7, 9, 13, 17, 29, 4, 44, 21, 58, 23, 46, 60, 27, 50, 64]
  Fragment all atoms: [7, 9, 13, 17, 54, 33, 29, 4, 41, 1, 34, 35, 36, 44, 21, 58, 23, 46, 60, 27, 50, 64]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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