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v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: 6BP
File name: alatis_output_compound.sdf

Formula: Br6Pt1
Compound mass: 674.502
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
6BP2XTH
4R6C
4OWH
PT43WU9
3WU7
3WUA
3WU8
1Y73
3WPK
3WPL
BR5AV4
4P98
4NSG
1W99
1OSY
4MTM
2RC3
4DEY
6IYX
3EJZ
1YIY
5FQE
2FSX
4TM4
6EZY
5WC8
3UPT
6R62
1VP6
2QFE
3MNG
3KLC
1OVL
4GOV
5ZQU
4TPY
2VOT
1L0Z
2VO5
3EJY
1M3D
1NUD
3SVD
4PWC
1FJ2
3DLU
6S29
4F8L
3FPJ
4TM3
6M9G
2OJT
2V2V
4XJF
4LSE
2WBK
6ADA
6FAQ
6FZ6
4U9Y
5D5C
2J6L
4LS4
6HTK
6EZ1
6HPQ
5MPW
2HYP
4GIO
5HMJ
4Z0T
2XHY
6GJT
3GW6
2VL4
4IL9
2HI8
6PDK
2VMF
5G2A
5LXR
5FEA
4B4P
2QKI
2Q44
2X42
3LD5
3Q17
3LPH
1DOC
1ROC
2EWF
6ARZ
4BQO
4NSF
2AWD
2VR4
3WCR
3SSK
2NTI
4ER6
4BWO
4B29
5JSR
1SR4
4POD
2DGL
3F59
6K5A
1XEQ
4HMK
4TPU
5NGW
1L9M
5AMT
4P4G
1D7W
6K5F
4IFD
2P3H
4QKO
6DV1
4LSI
2FE8
1F5M
5L7F
6BZQ
2WH6
2VJX
4QH1
2BYD
4DR9
4PA3
2IUO
3NYH
4M5X
4KVH
6AD7
1IJV
1N9K
2XNT
5AV2
1D2V
2WDU
4TM1
3C9A
3ONC
4DX8
2WB9
4YEM
4M5W
6JU1
4Y9C
1MHK
5N7L
5U7C
6GL4
3IVN
3R1D
5VZ4
5LXY
5C0U
4Y9F
5D5F
3MPR
6RRV
4AZI
1TO3
2HC0
1N8B
4NKT
6DRQ
3ZRG
3DY9
1XMT
2FPR
3JS7
1RER
6RNU
5MNU
4OWB
4FBS
1P2X
2XMD
2HT4
5T7A
5SWA
3U6X
5YER
3DD7
3V08
3NEG
1L1G
2X41
6GBG
4GP3
5OPP
5VEH
5IWO
5IUX
5EXG
4MY6
4BRP
6HTM
5DSF
4CO6
6GKI
2VQU
5AWX
2FCV
3SVE
3O7O
2VQT
5GY1
2HTK
4OXS
6QN3
4Q7O
4YGJ
4PA4
3TUU
3A3K
3I32
5H11
4ICH
6K5D
6NLH
4GOY
2R4G
3LLP
1GQB
4XJG
2HTL
6QGL
1F08
2V6Q
4GAO
1GQP
6BXR
1K63
5AV1
6ADB
5FKT
4WHI
5GXZ
4HHO
5MJ6
1Q3O
2V2Q
1Y63
1YIZ
5U7B
3FYS
5EFH
2O29
5GXF
1AZF
3STV
4KK6
5I5P
4QRY
3I18
3USH
5GY0
6HSW
3EKI
2ZC1
2G2P
5M65
6DDA
6BZT
4JYD
2VPS
6CNU
4ACK
1IHR
1JHD
5CYQ
2HLF
5U79
1EAO
4GP0
4G6V
3I4U
2X3H
2J18
5Y24
4K4R
5OGX
4XAN
3A0B
2J19
5U83
4LSF
4N8O
5GXY
5LWQ
6RO3
3M3G
4ERR
3X41
2CIY
3D7R
5Y9S
3LM7
1HD2
5SV6
2CIX
2B4G
6I3A
4N6C
1PWX
5C5V
4R34
4PM3
3R1E
3MD9
3FLH
5FKQ
3K9U
2O2I
4HHQ
3C51
1LZ9
3O31
4NKU
1XVC
3S8Y
3SRE
4KCM
3M4H
5U7A
2YKF
3F6O
3FFQ
2HT2
4JYE
6BPA
1MGY
6MEI
3BIY
6H45
1CIJ
4JXI
4LSH
2CIV
5C0E
4FBM
5N6X
5GU5
3DYE
3F2F
1D07
2H34
4POC
4U9S
6AD8
6FT9
3X42
6H42
2VPM
2HEK
6P1M
3V6Q
5MWK
4W6T
3QBK
4OWH
5IL0
3BBZ
5FHR
4P9P
1N11
2EZ0
5C9E
1XOK
6D0G
6AQK
2CIZ
3F0O
3ZOZ
3HNO
4MO1
6FY8
3R47
6GVA
5AHZ
2WQ1
4HC6
1KJL
4P9O
6HM7
5FKS
6G35
3G4Z
2WHR
3FPE
367D
4R6C
1DOE
4B0O
5JTC
4C46
1N0R
5DZ6
4LQK
5VWW
6JL0
3LQL
5M76
2XPN
3GGQ
6R2N
1GED
2RC7
6NXH
1K6E
3Q4W
5U82
4KAH
4YD4
4IO1
5LFT
3LEP
2WPF
4C8U
1IMX
5IWN
4KCO
6FN6
4H3S
6HPD
3F0P
6F01
2VF3
3CXM
5DAV
5JSP
6H0A
6GIV
4PA9
5U2P
1NUF
2XQG
5FKR
6EQQ
3FPG
2J3S
1WY0
2XQ3
3ONB
4H5B
1EG6
3FPF
3LZ3
4R86
3LQG
3LBO
5N2A
2X40
4Q2A
4UJA
2HT3
5EUS
3F75
4JRW
4HH5
4ABL
3G99
3TU8
6K5I
5C0T
1QUI
4XY8
1RAZ
3SRG
2FKK
1IZ8
3GUD
5M92
4Q1U
5WV3
4LU4
5NBX
2WQ4
BRO
PT2CH8
4JA1
3REK
5L3H
1RLI
3REL
6G5V
6MYL
3REI
4QI7
4LQ6
1SEN
3AZ5
1QVR
5DJM
6DLP
4OWC
4LW9
4PKE
2HR8
1RH7
6IG4
2XN0
5T7L
5IDD
2F83
5DJL
5I5Q
1QBI
4Q37
5OLE
1MOX
3N32
6HJT
5L3I
5OLD
1SJ7
3ONR
4YEO
5HMJ
4LL7
1GWB
5E5E
3W3S
1Q2L
5M1Y
2DQA
5IHG
6HJU
1RR7
4GCF
4QOT
2V1Q
4DPE
1OK9
1RNL
5LXW
1L4U
5V6I
5MU1
1LZW
3UN9
4LAB
6G5Y
1SF9
3AZ7
2HUV
6FHN
4OMB
6AQK
5DLB
6FFL
4OWB
4MWK
5MIJ
1W07
4EFQ
5L75
2CIM
1JJF
5HMV
4I1G
5ILF
2HUX
5HLL
5FM0
4OW9
3TJQ
1QYY
5HQ1
1YEM
4PGW
6GOJ
2Z8Z
6GOH
1BIX
5ILC
4OWE
2HUQ
1EU8
3W1I
1XC3
2B7K
4H5A
6NJW
1NNW
4YEN
2PL1
4YEM
2BHO
3TUR
6MW5
1UAS
3VDK
4PM3
5MIK
4YDX
5YKY
3N9J
3IWL
3M7K
2PIL
4RY3
1AY2
3VTN
4MWN
1IHH
2X2B
2IS9
4MWM
4GCB

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).